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Intron Name: Anas_platyrhynchos_platyrhynchos_19_4727836_4728815_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4727836 - 4728815

Intron Length:

980

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAGACAA

5'SS Class:

strong_major

3'SS Sequence:

CTTGTTTACCAAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CATTAAT

U12 Branch Point Sequence:

AGACCATTAATG

Flanking Amino Acid:

GNAPKKGLQKGMKTSSKQDE

Intron Amino Acid Position:

1088

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

90.2

0.95

0.8

76.9

33.7

Major BPS

79.4

0.73

0.9

79.6

29.1

Major PPT

64.7

0.33

1.1

63.9

41.1

Minor 5ss

31.3

-2.1

38.6

46.4

Minor BPS

-0

1.7

54.82

39.7

Associated Gene:

Gene:

TNRC6C

Ensembl Gene ID:

ENSAPLG00000005456

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000005667

4702793 - 4757735

54943