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Intron Name: Anas_platyrhynchos_platyrhynchos_19_4728983_4729863_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4728983 - 4729863

Intron Length:

881

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTACGTGCA

5'SS Class:

strong_major

3'SS Sequence:

TCTTTCCCTCCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AATTAAA

U12 Branch Point Sequence:

TAAAATTAAATC

Flanking Amino Acid:

PAAAPALCKPASKSMQEGWG

Intron Amino Acid Position:

1032

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.9

0.85

0.9

75.2

34.9

Major BPS

73.8

0.59

0.9

26.8

Major PPT

85.9

0.81

0.7

77.8

31.1

Minor 5ss

31.9

-2.1

3.3

41.7

44.9

Minor BPS

46.1

-0.3

1.8

54.03

37.7

Associated Gene:

Gene:

TNRC6C

Ensembl Gene ID:

ENSAPLG00000005456

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000005667

4702793 - 4757735

54943