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Intron Name: Anas_platyrhynchos_platyrhynchos_19_483177_487012_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

483177 - 487012

Intron Length:

3836

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATA|GTGAGTAAA

5'SS Class:

major

3'SS Sequence:

TGCTTTGTTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTTAC

U12 Branch Point Sequence:

TTTTACTAAACA

Flanking Amino Acid:

GPKDEDNDYIVDHTIIMYLL

Intron Amino Acid Position:

588

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

75.5

0.6

0.9

74.8

29.6

Major BPS

86.6

0.91

0.8

77.7

36.7

Major PPT

81.5

0.71

0.9

76.2

37.8

Minor 5ss

31.5

-2.1

2.7

34.9

Minor BPS

70.2

0.63

1.8

84.46

35.5

Associated Gene:

Gene:

SCO1

Ensembl Gene ID:

ENSAPLG00000027233

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000041234

482220 - 496367

14148

ENSAPLT00000036718

483048 - 497218

14171