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Intron Name: Anas_platyrhynchos_platyrhynchos_19_5007466_5008333_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5007466 - 5008333

Intron Length:

868

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTGAGCTGC

5'SS Class:

major

3'SS Sequence:

TGGCTCTCTGCAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CCCTGAA

U12 Branch Point Sequence:

CTCCCCTGAACC

Flanking Amino Acid:

GFGDHINNENCWQPIMKFIN

Intron Amino Acid Position:

341

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

76.1

0.62

61.9

39.6

Major BPS

57.2

0.18

1.1

48.9

36.6

Major PPT

76.1

0.59

0.9

69.7

36.7

Minor 5ss

38.9

-1.2

46.9

Minor BPS

63.6

0.41

1.5

68.78

42.5

Associated Gene:

Gene:

SEPTIN9

Ensembl Gene ID:

ENSAPLG00000008619

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000008998

4997477 - 5042560

45084