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Intron Name: Anas_platyrhynchos_platyrhynchos_19_5395578_5400826_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5395578 - 5400826

Intron Length:

5249

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAGTGGG

5'SS Class:

strong_major

3'SS Sequence:

ACTTTACTCCTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TAGTAAT

U12 Branch Point Sequence:

GTTTTAGTAATT

Flanking Amino Acid:

DEYWHPHIDKVTYGSFDYTS

Intron Amino Acid Position:

209

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

93.3

1.02

0.8

76.2

39.9

Major BPS

76.6

0.66

1.1

75.9

36.3

Major PPT

71.4

0.48

0.8

63.1

37.9

Minor 5ss

32.1

-2

3.1

40.6

45.6

Minor BPS

51.2

0.12

2.2

77.3

39.4

Associated Gene:

Gene:

OGFOD3

Ensembl Gene ID:

ENSAPLG00000008478

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000037532

5380383 - 5424783

44401

ENSAPLT00000033082

5380383 - 5426233

45851

ENSAPLT00000008810

5380383 - 5424546

44164