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Intron Name: Anas_platyrhynchos_platyrhynchos_19_5401104_5418698_R

Intron Information:

Intron Rank:

Intron Class:

major_hybrid

Intron Phase:

Intron Coordinates:

5401104 - 5418698

Intron Length:

17595

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TAG|GTAATTTTT

5'SS Class:

strong_major

3'SS Sequence:

GGAGGAAGCTTAG|C

3'SS Class:

major_hybrid

U2 Branch Point Sequence:

CTTTGAT

U12 Branch Point Sequence:

TTTCCTTTGATT

Flanking Amino Acid:

ITREEAERIRSSEEAVKLNE

Intron Amino Acid Position:

116

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

88.9

0.92

0.9

89.8

23.7

Major BPS

0.85

0.9

39.9

Major PPT

45.7

-0.2

33.2

40.5

Minor 5ss

46.2

-0.4

2.8

67.4

43.6

Minor BPS

0.9

1.1

88.36

29.9

Associated Gene:

Gene:

OGFOD3

Ensembl Gene ID:

ENSAPLG00000008478

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000033082

5380383 - 5426233

45851

ENSAPLT00000008810

5380383 - 5424546

44164

ENSAPLT00000037532

5380383 - 5424783

44401