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Intron Name: Anas_platyrhynchos_platyrhynchos_19_5418775_5424244_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5418775 - 5424244

Intron Length:

5470

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTACGGGGG

5'SS Class:

major

3'SS Sequence:

CTTTGTGTTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TGATAAT

U12 Branch Point Sequence:

AAGATGATAATT

Flanking Amino Acid:

GDYGAGRRFEGCTPRKCGRG

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

77.3

0.64

1.1

58.9

Major BPS

72.6

0.56

1.2

72.3

40.4

Major PPT

82.1

0.72

0.9

76.3

37.7

Minor 5ss

27.5

-2.6

3.6

37.8

Minor BPS

42.2

-0.5

2.1

56.71

39.9

Associated Gene:

Gene:

OGFOD3

Ensembl Gene ID:

ENSAPLG00000008478

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000037532

5380383 - 5424783

44401

ENSAPLT00000033082

5380383 - 5426233

45851

ENSAPLT00000008810

5380383 - 5424546

44164