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Intron Name: Anas_platyrhynchos_platyrhynchos_19_5424792_5425246_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5424792 - 5425246

Intron Length:

455

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGGGGG

5'SS Class:

strong_major

3'SS Sequence:

CCCCCTGCCACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CCATAAA

U12 Branch Point Sequence:

AAAGCCCTAACC

Flanking Amino Acid:

APPRAAYLRQVLPLLRTLGA

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.87

0.9

67.8

43.5

Major BPS

53.7

0.09

1.1

55.9

35.8

Major PPT

66.2

0.36

0.8

59.3

29.9

Minor 5ss

28.6

-2.5

3.5

37.8

47.1

Minor BPS

55.2

0.14

1.8

64.09

40.7

Associated Gene:

Gene:

HEXD

Ensembl Gene ID:

ENSAPLG00000008436

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000029842

5424708 - 5432843

8136

ENSAPLT00000008780

5424708 - 5432843

8136