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Intron Name: Anas_platyrhynchos_platyrhynchos_19_5425820_5427226_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5425820 - 5427226

Intron Length:

1407

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTGGGACTT

5'SS Class:

major

3'SS Sequence:

TTTGATGTTTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

GTTTGAT

U12 Branch Point Sequence:

ATTTGTTTGATG

Flanking Amino Acid:

VKWFHIGCDEVYYLGEGEES

Intron Amino Acid Position:

150

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

78.1

0.66

71.5

40.2

Major BPS

78.6

0.71

1.2

71.4

45.1

Major PPT

80.4

0.68

77.1

41.6

Minor 5ss

31.1

-2.2

3.5

46.9

48.4

Minor BPS

55.4

0.02

1.8

63.92

38.8

Associated Gene:

Gene:

HEXD

Ensembl Gene ID:

ENSAPLG00000008436

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000029842

5424708 - 5432843

8136

ENSAPLT00000008780

5424708 - 5432843

8136