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Intron Name: Anas_platyrhynchos_platyrhynchos_19_5427411_5428776_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5427411 - 5428776

Intron Length:

1366

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGTGTGAC

5'SS Class:

strong_major

3'SS Sequence:

CTGTTCATTTCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TGTTCAT

U12 Branch Point Sequence:

TTATTTAGAATA

Flanking Amino Acid:

LRGISEETLAESGVPQLVQP

Intron Amino Acid Position:

211

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.4

0.79

0.9

73.6

30.4

Major BPS

84.8

0.86

85.7

34.9

Major PPT

80.8

0.69

0.9

77.9

35.1

Minor 5ss

33.6

-1.9

3.1

42.4

45.1

Minor BPS

49.9

-0

1.6

65.53

34.7

Associated Gene:

Gene:

HEXD

Ensembl Gene ID:

ENSAPLG00000008436

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000029842

5424708 - 5432843

8136