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Intron Name: Anas_platyrhynchos_platyrhynchos_19_5428849_5429298_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5428849 - 5429298

Intron Length:

450

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTTTGTACT

5'SS Class:

major

3'SS Sequence:

TGTCTTATTTCAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATCTGAT

U12 Branch Point Sequence:

TGTGTCTTATTT

Flanking Amino Acid:

YAADLDVESKVLLVEKYRRC

Intron Amino Acid Position:

235

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

77.6

0.65

1.1

78.3

35.6

Major BPS

82.5

0.81

0.8

71.4

36.6

Major PPT

84.1

0.77

0.8

81.7

34.6

Minor 5ss

40.8

-1

2.4

53.1

43.6

Minor BPS

59.3

0.37

1.7

75.8

41.6

Associated Gene:

Gene:

HEXD

Ensembl Gene ID:

ENSAPLG00000008436

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000008780

5424708 - 5432843

8136