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Intron Name: Anas_platyrhynchos_platyrhynchos_19_5429495_5430456_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5429495 - 5430456

Intron Length:

962

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAGTAGT

5'SS Class:

strong_major

3'SS Sequence:

TTTGTTTTTTAAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

GTCTAAT

U12 Branch Point Sequence:

TAATTAGTAAAT

Flanking Amino Acid:

LQGIALTGWQRYDHFSVLCE

Intron Amino Acid Position:

300

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

97.3

1.11

0.7

90.9

28.7

Major BPS

76.7

0.66

1.2

77.9

34.9

Major PPT

81.9

0.72

86.9

31.1

Minor 5ss

37.5

-1.4

2.8

51.6

44.9

Minor BPS

46.2

-0.2

2.2

68.42

41.7

Associated Gene:

Gene:

HEXD

Ensembl Gene ID:

ENSAPLG00000008436

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000029842

5424708 - 5432843

8136

ENSAPLT00000008780

5424708 - 5432843

8136