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Intron Name: Anas_platyrhynchos_platyrhynchos_19_5430540_5431337_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5430540 - 5431337

Intron Length:

798

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ACG|GTACAATGA

5'SS Class:

major

3'SS Sequence:

GTCTTCTGCCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGTTTAC

U12 Branch Point Sequence:

TTTTGTTTACCT

Flanking Amino Acid:

LAGCLQALENGGYSETVKEN

Intron Amino Acid Position:

328

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

62.2

0.29

1.1

53.5

40.5

Major BPS

71.4

0.53

1.1

63.4

Major PPT

72.3

0.5

64.9

41.3

Minor 5ss

36.1

-1.6

3.4

46.7

48.6

Minor BPS

64.1

0.52

87.23

Associated Gene:

Gene:

HEXD

Ensembl Gene ID:

ENSAPLG00000008436

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000029842

5424708 - 5432843

8136

ENSAPLT00000008780

5424708 - 5432843

8136