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Intron Name: Anas_platyrhynchos_platyrhynchos_19_5431417_5431491_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5431417 - 5431491

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAAAATTC

5'SS Class:

strong_major

3'SS Sequence:

TCTTTTTGGACAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AACTAAT

U12 Branch Point Sequence:

TCTTTTTGGACA

Flanking Amino Acid:

MPNLEIDTFMSTSLGTFPGS

Intron Amino Acid Position:

354

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.4

0.79

0.9

78.4

30.1

Major BPS

77.9

0.69

0.8

75.9

Major PPT

77.1

0.61

75.5

38.3

Minor 5ss

41.9

-0.9

3.2

45.7

Minor BPS

60.2

0.31

1.4

69.96

36.5

Associated Gene:

Gene:

HEXD

Ensembl Gene ID:

ENSAPLG00000008436

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000029842

5424708 - 5432843

8136

ENSAPLT00000008780

5424708 - 5432843

8136