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Intron Name: Anas_platyrhynchos_platyrhynchos_19_54349_54893_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

54349 - 54893

Intron Length:

545

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTGAGTCAT

5'SS Class:

strong_major

3'SS Sequence:

GCTTTGTTTTCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATCTCAT

U12 Branch Point Sequence:

TCTCATTTGAAG

Flanking Amino Acid:

SDNAYQFMLTDHDNQSILIT

Intron Amino Acid Position:

169

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.9

0.8

0.9

75.8

35.2

Major BPS

86.1

0.9

0.7

85.7

22.9

Major PPT

83.3

0.75

0.9

80.2

37.3

Minor 5ss

30.6

-2.2

2.9

Minor BPS

47.7

-0.3

1.7

53.94

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000013659

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000014366

51075 - 87160

36086

ENSAPLT00000008942

50339 - 87160

36822