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Intron Name: Anas_platyrhynchos_platyrhynchos_19_5439789_5440433_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5439789 - 5440433

Intron Length:

645

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAAGATGC

5'SS Class:

strong_major

3'SS Sequence:

TACAATTTTACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCTTAT

U12 Branch Point Sequence:

TTTTGTTTTACA

Flanking Amino Acid:

VAAQNLEQWEEAIFDKNKGS

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

90.1

0.95

0.8

75.9

34.8

Major BPS

91.4

1.03

0.7

79.9

34.9

Major PPT

75.8

0.58

0.9

68.4

41.5

Minor 5ss

38.3

-1.3

3.1

50.9

45.7

Minor BPS

61.2

0.34

2.1

78.96

37.6

Associated Gene:

Gene:

CYBC1

Ensembl Gene ID:

ENSAPLG00000008407

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000008751

5438848 - 5442976

4129