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Intron Name: Anas_platyrhynchos_platyrhynchos_19_5441712_5442891_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5441712 - 5442891

Intron Length:

1180

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TTG|GTAAGACTG

5'SS Class:

strong_major

3'SS Sequence:

CTTCTTATTCTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTCTAAT

U12 Branch Point Sequence:

CTTGTTCTAATT

Flanking Amino Acid:

PGIRSWSVFVGIASIGLAAA

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.75

68.2

42.8

Major BPS

94.5

1.11

0.6

92.2

14.6

Major PPT

81.1

0.7

0.8

35.3

Minor 5ss

35.7

-1.6

3.2

45.4

43.6

Minor BPS

51.7

0.13

1.8

71.16

Associated Gene:

Gene:

CYBC1

Ensembl Gene ID:

ENSAPLG00000008407

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000008751

5438848 - 5442976

4129