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Intron Name: Anas_platyrhynchos_platyrhynchos_19_5456812_5460939_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5456812 - 5460939

Intron Length:

4128

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTGAGAACT

5'SS Class:

strong_major

3'SS Sequence:

CCTGTCATTCTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTGTCAT

U12 Branch Point Sequence:

GTGTCTGTGATT

Flanking Amino Acid:

ALPMFASACPGWIRYAERVL

Intron Amino Acid Position:

115

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.73

0.9

32.7

Major BPS

72.5

0.56

1.2

39.9

Major PPT

71.5

0.48

0.9

62.5

38.5

Minor 5ss

30.8

-2.2

2.9

38.9

40.1

Minor BPS

50.6

0.1

70.84

41.1

Associated Gene:

Gene:

NARF

Ensembl Gene ID:

ENSAPLG00000007817

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000008138

5453468 - 5466766

13299