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Intron Name: Anas_platyrhynchos_platyrhynchos_19_5462797_5465326_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5462797 - 5465326

Intron Length:

2530

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TTT|GTAAGTAGC

5'SS Class:

major

3'SS Sequence:

ATTGTTTTCTAAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AACTAAA

U12 Branch Point Sequence:

TAGGAGTTGACC

Flanking Amino Acid:

KDMTEVAVDSLFGEIKEGDV

Intron Amino Acid Position:

222

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.61

1.1

70.9

39.2

Major BPS

68.7

0.47

0.9

67.9

Major PPT

71.4

0.48

1.1

75.7

37.9

Minor 5ss

38.7

-1.3

2.8

51.8

39.1

Minor BPS

44.2

-0.4

2.3

55.18

43.3

Associated Gene:

Gene:

NARF

Ensembl Gene ID:

ENSAPLG00000007817

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000008138

5453468 - 5466766

13299