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Intron Name: Anas_platyrhynchos_platyrhynchos_19_5465465_5465804_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5465465 - 5465804

Intron Length:

340

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAA|GTAAGTCAC

5'SS Class:

strong_major

3'SS Sequence:

TATACCTTCACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATTTAAA

U12 Branch Point Sequence:

TATACCTTCACA

Flanking Amino Acid:

DVKEITYKALKNKDFQEVTL

Intron Amino Acid Position:

268

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.4

0.81

0.9

75.1

35.1

Major BPS

81.6

0.78

0.8

24.9

Major PPT

75.6

0.58

0.9

68.8

36.7

Minor 5ss

36.2

-1.6

2.9

44.9

36.9

Minor BPS

67.4

0.54

1.8

77.62

38.8

Associated Gene:

Gene:

NARF

Ensembl Gene ID:

ENSAPLG00000007817

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000008138

5453468 - 5466766

13299