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Intron Name: Anas_platyrhynchos_platyrhynchos_19_55118_59986_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

55118 - 59986

Intron Length:

4869

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTATGTGAT

5'SS Class:

strong_major

3'SS Sequence:

TCCATGTAACTAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TTTCCAT

U12 Branch Point Sequence:

TTCCATGTAACT

Flanking Amino Acid:

KKDHQPGKMQGTLEDQIIQA

Intron Amino Acid Position:

216

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

89.2

0.92

0.8

83.1

28.6

Major BPS

77.3

0.68

1.2

86.7

32.3

Major PPT

0.18

51.4

41.8

Minor 5ss

40.4

-1.1

3.2

57.3

47.4

Minor BPS

49.4

0.03

2.2

73.99

42.9

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000013659

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000014366

51075 - 87160

36086

ENSAPLT00000008942

50339 - 87160

36822