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Intron Name: Anas_platyrhynchos_platyrhynchos_19_5535660_5538429_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5535660 - 5538429

Intron Length:

2770

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTATTTAAA

5'SS Class:

major

3'SS Sequence:

TTATGCTCTACAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTTAT

U12 Branch Point Sequence:

TTCTTTTTATGC

Flanking Amino Acid:

SPLPSPTGTISAANSCPSSP

Intron Amino Acid Position:

446

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

79.5

0.69

77.8

31.4

Major BPS

96.5

1.15

0.6

34.2

Major PPT

79.9

0.67

0.9

73.2

37.1

Minor 5ss

41.2

-1

2.5

45.5

Minor BPS

51.2

0.02

1.9

64.74

41.8

Associated Gene:

Gene:

FOXK2

Ensembl Gene ID:

ENSAPLG00000007723

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000008021

5500613 - 5547251

46639