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Intron Name: Anas_platyrhynchos_platyrhynchos_19_5539176_5541987_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5539176 - 5541987

Intron Length:

2812

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAACTTG

5'SS Class:

strong_major

3'SS Sequence:

TTATGTTCCATAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTTAT

U12 Branch Point Sequence:

ATTTTTTTATGT

Flanking Amino Acid:

YYRTADKGWQNSIRHNLSLN

Intron Amino Acid Position:

545

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.5

0.72

72.1

40.4

Major BPS

96.5

1.15

0.6

34.2

Major PPT

0.54

0.9

69.3

36.8

Minor 5ss

46.8

-0.3

2.9

64.1

47.4

Minor BPS

56.7

0.29

1.9

77.22

39.9

Associated Gene:

Gene:

FOXK2

Ensembl Gene ID:

ENSAPLG00000007723

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000008021

5500613 - 5547251

46639