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Intron Name: Anas_platyrhynchos_platyrhynchos_19_5542182_5543018_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5542182 - 5543018

Intron Length:

837

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TAG|GTAAGGAAA

5'SS Class:

strong_major

3'SS Sequence:

TTTTTAAATGCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTAAA

U12 Branch Point Sequence:

TCATTTTTAAAT

Flanking Amino Acid:

FRTPLGPLSSRSAPASPNHS

Intron Amino Acid Position:

609

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

91.6

0.98

0.8

28.8

Major BPS

90.4

0.7

90.2

19.3

Major PPT

80.5

0.69

0.9

75.7

37.3

Minor 5ss

31.6

-2.1

3.1

46.4

Minor BPS

67.4

0.63

1.3

77.29

39.3

Associated Gene:

Gene:

FOXK2

Ensembl Gene ID:

ENSAPLG00000007723

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000008021

5500613 - 5547251

46639