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Intron Name: Anas_platyrhynchos_platyrhynchos_19_5543195_5544252_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5543195 - 5544252

Intron Length:

1058

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAGGAAT

5'SS Class:

strong_major

3'SS Sequence:

TCTTTCTTGATAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AATTAAA

U12 Branch Point Sequence:

TCTTTCTTGATA

Flanking Amino Acid:

QEARFAQSAPGSPLSSQPVL

Intron Amino Acid Position:

668

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

88.2

0.9

0.8

83.8

Major BPS

73.8

0.59

0.9

26.8

Major PPT

78.3

0.64

0.9

76.3

32.4

Minor 5ss

28.5

-2.5

3.1

38.7

46.6

Minor BPS

74.3

0.76

1.1

77.25

33.8

Associated Gene:

Gene:

FOXK2

Ensembl Gene ID:

ENSAPLG00000007723

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000008021

5500613 - 5547251

46639