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Intron Name: Anas_platyrhynchos_platyrhynchos_19_5561338_5561876_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5561338 - 5561876

Intron Length:

539

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAGGTGCA

5'SS Class:

strong_major

3'SS Sequence:

TTGTCTCTTGCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AATTTAT

U12 Branch Point Sequence:

GTCATAAGAATT

Flanking Amino Acid:

EVKAVKLRRDRIVVVLDSMI

Intron Amino Acid Position:

111

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.6

0.84

0.9

35.3

Major BPS

79.9

0.74

0.9

69.7

37.1

Major PPT

86.1

0.81

0.8

81.1

30.9

Minor 5ss

31.6

-2.1

3.3

41.1

45.4

Minor BPS

41.2

-0.5

1.8

56.38

39.6

Associated Gene:

Gene:

WDR45B

Ensembl Gene ID:

ENSAPLG00000007533

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000007847

5555577 - 5571257

15681