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Intron Name: Anas_platyrhynchos_platyrhynchos_19_5574361_5574795_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5574361 - 5574795

Intron Length:

435

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGG|GTAAGCAAA

5'SS Class:

strong_major

3'SS Sequence:

GTCTGTTTTCAAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTATAAT

U12 Branch Point Sequence:

GCTATTATAATG

Flanking Amino Acid:

GMDRLWRPNKVLSLQDLCCR

Intron Amino Acid Position:

189

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.5

0.74

74.1

38.3

Major BPS

87.8

0.94

0.9

86.6

28.1

Major PPT

69.8

0.45

1.1

67.1

Minor 5ss

38.3

-1.3

2.8

40.3

45.6

Minor BPS

46.8

-0.3

1.6

48.87

39.3

Associated Gene:

Gene:

RAB40B

Ensembl Gene ID:

ENSAPLG00000027488

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000022607

5574098 - 5595834

21737