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Intron Name: Anas_platyrhynchos_platyrhynchos_19_5575585_5576355_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5575585 - 5576355

Intron Length:

771

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGCTAA

5'SS Class:

strong_major

3'SS Sequence:

GTATTTTATACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

TTTTTTTTAATT

Flanking Amino Acid:

IFRSYSRGAQGVILVYDITN

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

90.3

0.95

0.8

80.2

30.6

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

78.3

0.64

73.1

41.1

Minor 5ss

43.2

-0.8

2.9

55.3

48.9

Minor BPS

84.9

1.17

0.8

94.97

24.6

Associated Gene:

Gene:

RAB40B

Ensembl Gene ID:

ENSAPLG00000027488

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000022607

5574098 - 5595834

21737