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Intron Name: Anas_platyrhynchos_platyrhynchos_19_5577828_5595692_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5577828 - 5595692

Intron Length:

17865

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CCG|GTGAGCGCC

5'SS Class:

major

3'SS Sequence:

GTTTTCCCCTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATCTAAG

U12 Branch Point Sequence:

ACTTCCATGACT

Flanking Amino Acid:

AAESPYGHPAGIDYKTTTIL

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

74.7

0.58

60.6

38.8

Major BPS

61.8

0.29

1.5

69.7

35.5

Major PPT

80.6

0.69

0.8

30.8

Minor 5ss

32.6

-2

3.3

43.1

44.2

Minor BPS

68.5

0.66

1.6

82.71

38.3

Associated Gene:

Gene:

RAB40B

Ensembl Gene ID:

ENSAPLG00000027488

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000022607

5574098 - 5595834

21737