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Intron Name: Anas_platyrhynchos_platyrhynchos_19_5606256_5606636_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5606256 - 5606636

Intron Length:

381

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAGGTTGT

5'SS Class:

strong_major

3'SS Sequence:

TCTGTCCTTTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CTGTAAT

U12 Branch Point Sequence:

ACATCTGTAATT

Flanking Amino Acid:

TVTCCGYLPQVNDWQTDWVT

Intron Amino Acid Position:

157

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.6

0.86

0.9

78.8

38.3

Major BPS

72.1

0.55

1.2

73.3

39.1

Major PPT

84.1

0.77

0.8

81.1

Minor 5ss

40.5

-1.1

3.2

58.3

46.4

Minor BPS

54.3

0.21

70.49

41.3

Associated Gene:

Gene:

FN3KRP

Ensembl Gene ID:

ENSAPLG00000011833

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000012314

5602437 - 5607854

5418