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Intron Name: Anas_platyrhynchos_platyrhynchos_19_5626695_5627731_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5626695 - 5627731

Intron Length:

1037

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTACAAAAA

5'SS Class:

major

3'SS Sequence:

CTTCATGTTACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTGAA

U12 Branch Point Sequence:

GCTTACTAAATT

Flanking Amino Acid:

AFKFLYIITKVRGYKLFLRL

Intron Amino Acid Position:

115

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

73.8

0.56

70.4

35.3

Major BPS

87.2

0.92

0.8

77.7

37.1

Major PPT

78.6

0.64

0.9

71.7

37.9

Minor 5ss

31.1

-2.2

3.2

39.8

45.8

Minor BPS

56.6

0.28

1.9

73.41

43.7

Associated Gene:

Gene:

TBCD

Ensembl Gene ID:

ENSAPLG00000010791

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000011355

5623209 - 5728310

105102