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Intron Name: Anas_platyrhynchos_platyrhynchos_19_5644939_5646171_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5644939 - 5646171

Intron Length:

1233

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTTAGTTTA

5'SS Class:

strong_major

3'SS Sequence:

TTTATTTGTTTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTTAT

U12 Branch Point Sequence:

AGATTATTAACT

Flanking Amino Acid:

TFVKPKVAKWRYQRGCRSLA

Intron Amino Acid Position:

320

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.9

0.85

85.3

Major BPS

96.5

1.15

0.6

34.2

Major PPT

81.2

0.7

0.9

81.3

36.3

Minor 5ss

40.1

-1.1

2.7

50.2

Minor BPS

64.7

0.54

1.6

77.4

38.2

Associated Gene:

Gene:

TBCD

Ensembl Gene ID:

ENSAPLG00000010791

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000011355

5623209 - 5728310

105102