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Intron Name: Anas_platyrhynchos_platyrhynchos_19_5647769_5650937_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5647769 - 5650937

Intron Length:

3169

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TAG|GTAAAAATC

5'SS Class:

strong_major

3'SS Sequence:

GTTTTAAAATTAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTAAA

U12 Branch Point Sequence:

CTAGTCTTAACA

Flanking Amino Acid:

DVVGSLLDCFSFQETDNAWH

Intron Amino Acid Position:

413

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.1

0.8

0.9

81.4

30.4

Major BPS

90.4

0.7

90.2

19.3

Major PPT

62.7

0.29

62.1

42.6

Minor 5ss

37.4

-1.4

3.2

51.9

44.9

Minor BPS

68.2

0.57

1.4

71.36

41.1

Associated Gene:

Gene:

TBCD

Ensembl Gene ID:

ENSAPLG00000010791

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000011355

5623209 - 5728310

105102