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Intron Name: Anas_platyrhynchos_platyrhynchos_19_5651033_5678166_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5651033 - 5678166

Intron Length:

27134

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTAAGTTGC

5'SS Class:

strong_major

3'SS Sequence:

TTCCATTTCACAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TCCTAAT

U12 Branch Point Sequence:

TTCCATTTCACA

Flanking Amino Acid:

GLLLPSRISDVVPVILKALT

Intron Amino Acid Position:

445

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

87.2

0.88

0.9

74.9

36.2

Major BPS

81.9

0.79

0.9

80.1

Major PPT

80.6

0.69

0.8

75.3

32.8

Minor 5ss

40.7

-1

2.8

49.7

41.9

Minor BPS

49.4

-0

1.9

65.36

41.2

Associated Gene:

Gene:

TBCD

Ensembl Gene ID:

ENSAPLG00000010791

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000011355

5623209 - 5728310

105102