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Intron Name: Anas_platyrhynchos_platyrhynchos_19_5687405_5692190_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5687405 - 5692190

Intron Length:

4786

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TCT|GTAAGTTAC

5'SS Class:

major

3'SS Sequence:

CTCTGTTCTTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTGGTAT

U12 Branch Point Sequence:

GTTTTGGTATGT

Flanking Amino Acid:

RDVNCRRAASAAFQENVGRQ

Intron Amino Acid Position:

517

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

75.4

0.6

1.1

71.7

34.5

Major BPS

56.4

0.16

1.6

57.4

49.1

Major PPT

82.8

0.74

0.8

80.3

31.8

Minor 5ss

43.4

-0.7

2.8

62.5

42.2

Minor BPS

38.3

-0.8

2.7

63.38

Associated Gene:

Gene:

TBCD

Ensembl Gene ID:

ENSAPLG00000010791

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000011355

5623209 - 5728310

105102