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Intron Name: Anas_platyrhynchos_platyrhynchos_19_5692221_5695655_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5692221 - 5695655

Intron Length:

3435

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTACGGTAA

5'SS Class:

strong_major

3'SS Sequence:

ACAATGTTCATAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATATTAT

U12 Branch Point Sequence:

TTCCTCTTATCT

Flanking Amino Acid:

AAFQENVGRQGTFPHGIDIL

Intron Amino Acid Position:

527

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.1

0.73

72.1

35.8

Major BPS

75.9

0.64

66.1

40.5

Major PPT

60.7

0.24

53.5

40.7

Minor 5ss

-1.7

3.4

46.3

Minor BPS

65.4

0.56

1.6

80.81

41.1

Associated Gene:

Gene:

TBCD

Ensembl Gene ID:

ENSAPLG00000010791

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000011355

5623209 - 5728310

105102