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Intron Name: Anas_platyrhynchos_platyrhynchos_19_5714228_5715934_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5714228 - 5715934

Intron Length:

1707

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTACAGTAG

5'SS Class:

major

3'SS Sequence:

GCCTTTGTTACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TAGTAAA

U12 Branch Point Sequence:

AATGCATTAAGT

Flanking Amino Acid:

VSSTARQHIKESAVSALAAL

Intron Amino Acid Position:

728

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

70.2

0.48

1.1

60.1

41.3

Major BPS

67.4

0.43

1.1

67.9

36.3

Major PPT

77.7

0.62

0.9

71.1

38.6

Minor 5ss

34.4

-1.8

3.5

49.3

Minor BPS

53.3

0.18

72.86

43.6

Associated Gene:

Gene:

TBCD

Ensembl Gene ID:

ENSAPLG00000010791

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000011355

5623209 - 5728310

105102