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Intron Name: Anas_platyrhynchos_platyrhynchos_19_5720617_5725206_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5720617 - 5725206

Intron Length:

4590

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTAAGATGC

5'SS Class:

strong_major

3'SS Sequence:

TCTGTTTCAACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCTGAT

U12 Branch Point Sequence:

TCTGTTTCAACA

Flanking Amino Acid:

TTDSRGDVGGWVRKAAMTSL

Intron Amino Acid Position:

872

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.3

0.76

0.9

68.6

37.4

Major BPS

91.3

1.03

0.7

79.6

35.6

Major PPT

77.4

0.62

0.9

73.4

35.9

Minor 5ss

38.4

-1.3

3.1

47.7

42.5

Minor BPS

0.18

1.6

66.33

40.9

Associated Gene:

Gene:

TBCD

Ensembl Gene ID:

ENSAPLG00000010791

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000011355

5623209 - 5728310

105102