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Intron Name: Anas_platyrhynchos_platyrhynchos_19_5786079_5836273_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

5786079 - 5836273

Intron Length:

50195

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTATTCTTA

5'SS Class:

weak_major

3'SS Sequence:

ACCTTTTTTCTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TCTTAAT

U12 Branch Point Sequence:

ATTCTCTTAATT

Flanking Amino Acid:

NLTEEQLLTQVFTSHGPTVI

Intron Amino Acid Position:

163

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

73.1

0.54

1.1

69.5

37.4

Major BPS

0.92

0.9

86.2

29.1

Major PPT

80.1

0.68

0.8

36.8

Minor 5ss

62.6

0.42

2.2

73.5

43.1

Minor BPS

78.1

0.96

1.1

87.57

Associated Gene:

Gene:

B3GNTL1

Ensembl Gene ID:

ENSAPLG00000010702

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000011164

5755599 - 5871700

116102