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Intron Name: Anas_platyrhynchos_platyrhynchos_19_602664_607193_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

602664 - 607193

Intron Length:

4530

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GTG|GTAAGTGTT

5'SS Class:

strong_major

3'SS Sequence:

CTGTTTTCTTTAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TCCTAAT

U12 Branch Point Sequence:

TTTTTCCTAATT

Flanking Amino Acid:

SPSFINFVNLCLTKDESKRP

Intron Amino Acid Position:

357

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

90.6

0.96

0.8

27.7

Major BPS

81.9

0.79

0.9

80.1

Major PPT

82.1

0.72

0.8

81.3

30.8

Minor 5ss

38.8

-1.3

3.4

43.6

Minor BPS

74.5

0.85

1.6

92.26

Associated Gene:

Gene:

MAP2K4

Ensembl Gene ID:

ENSAPLG00000013074

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000039429

546724 - 608442

61719

ENSAPLT00000013644

546724 - 608862

62139