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Intron Name: Anas_platyrhynchos_platyrhynchos_19_6093667_6093841_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

6093667 - 6093841

Intron Length:

175

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTATTTATT

5'SS Class:

strong_major

3'SS Sequence:

CACTTGCTTGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATTTGAA

U12 Branch Point Sequence:

TCTTTCACAAAT

Flanking Amino Acid:

VTEENKKEYVRLYVNWRFLR

Intron Amino Acid Position:

517

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.6

0.74

85.4

30.8

Major BPS

78.4

0.71

0.9

69.4

37.7

Major PPT

75.8

0.58

0.9

68.8

36.8

Minor 5ss

47.8

-0.2

2.5

68.9

41.7

Minor BPS

50.3

0.09

1.9

74.24

42.2

Associated Gene:

Gene:

SMURF2

Ensembl Gene ID:

ENSAPLG00000009867

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000010322

6065234 - 6098262

33029