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Intron Name: Anas_platyrhynchos_platyrhynchos_19_6093963_6095871_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

6093963 - 6095871

Intron Length:

1909

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTCAGTACA

5'SS Class:

strong_major

3'SS Sequence:

TTTAAATTTACAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTAAA

U12 Branch Point Sequence:

TATATTTTAAAT

Flanking Amino Acid:

LKTFDEKELELIICGLGKID

Intron Amino Acid Position:

558

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.2

0.76

1.2

80.7

33.8

Major BPS

90.4

0.7

90.2

19.3

Major PPT

80.6

0.69

0.9

73.4

40.6

Minor 5ss

31.4

-2.1

2.4

35.4

40.5

Minor BPS

65.7

0.57

1.4

78.88

36.8

Associated Gene:

Gene:

SMURF2

Ensembl Gene ID:

ENSAPLG00000009867

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000010322

6065234 - 6098262

33029