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Intron Name: Anas_platyrhynchos_platyrhynchos_19_6111996_6114877_R


Intron Information:

Intron Rank:
5

Intron Class:
major

Intron Phase:
1

Intron Coordinates:
6111996 - 6114877

Intron Length:
2882

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
TAA|GTAGAAACC

5'SS Class:
major

3'SS Sequence:
GTTTTTAAAATAG|A

3'SS Class:
major_PPT

U2 Branch Point Sequence:
TTTTAAA

U12 Branch Point Sequence:
TTATCTATAAGT

Flanking Amino Acid:
NCQELETPTVKMKSLFCFSR

Intron Amino Acid Position:
206

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
62.1
0.29
1.1
59.6
37.9

Major BPS
90.4
1
0.7
90.2
19.3

Major PPT
67.2
0.39
1
64.2
40.7

Minor 5ss
34.4
-1.8
3.3
44.1
37.6

Minor BPS
60.8
0.42
1.9
81.68
39.8

Associated Gene:

Gene:
CEP95

Ensembl Gene ID:

Chromosome:
19

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

6104186 - 6122960
18775