Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_19_6112392_6114911_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

6112392 - 6114911

Intron Length:

2520

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TTG|GTTAACTGT

5'SS Class:

weak_major

3'SS Sequence:

ATCATTTTTCTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TAATCAT

U12 Branch Point Sequence:

AAAATCTTAACT

Flanking Amino Acid:

QSSASQSSALVPWVYGTSTS

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

60.1

0.24

1.2

56.9

42.7

Major BPS

80.4

0.76

80.3

31.8

Major PPT

77.4

0.62

0.9

69.7

40.9

Minor 5ss

41.4

-1

45.1

Minor BPS

70.1

0.71

1.3

77.42

38.2

Associated Gene:

Gene:

CEP95

Ensembl Gene ID:

ENSAPLG00000009428

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000009876

6104186 - 6115091

10906