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PNB, Uconn

Construction by: Audrey Weber

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Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_19_6119592_6120557_R

Intron Information:

Intron Rank:
2
Intron Class:
major
Intron Phase:
1
Intron Coordinates:
6119592 - 6120557
Intron Length:
966

Sequence Information:

Terminal Dinucleotides:
GT-AG
5'SS Sequence:
CAG|GTGGGAACA
5'SS Class:
major
3'SS Sequence:
TTGTTTTAAATAG|A
3'SS Class:
major_PPT
U2 Branch Point Sequence:
TATTTAT
U12 Branch Point Sequence:
TTTGTTTTAAAT
Flanking Amino Acid:
YESILGEKVPDFIATPRTQE
Intron Amino Acid Position:
64

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev
Major 5ss
78
0.66
1
70.4
35.4
Major BPS
88.7
0.96
0.8
78
36.5
Major PPT
72.4
0.5
1
70.7
39.1
Minor 5ss
26.9
-2.7
2.9
31.8
42.3
Minor BPS
69
0.67
1.5
84.29
36.6

Associated Gene:

Gene:
CEP95
Ensembl Gene ID:
ENSAPLG00000009428
Chromosome:
19

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length
ENSAPLT00000025756
6104186 - 6122960
18775