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Intron Name: Anas_platyrhynchos_platyrhynchos_19_621814_625416_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

621814 - 625416

Intron Length:

3603

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TCG|GTAAGTGGA

5'SS Class:

strong_major

3'SS Sequence:

CCGTTTGCTGCAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCCTAAT

U12 Branch Point Sequence:

ATGCCCTCTACT

Flanking Amino Acid:

QTNSCLRTASQMTRSQQMDE

Intron Amino Acid Position:

702

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.5

0.84

0.9

72.8

38.8

Major BPS

81.9

0.79

0.9

80.1

Major PPT

74.6

0.55

0.9

68.7

37.2

Minor 5ss

32.5

-2

3.2

40.9

45.4

Minor BPS

52.8

0.17

1.9

72.6

43.7

Associated Gene:

Gene:

MYOCD

Ensembl Gene ID:

ENSAPLG00000013526

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000022098

620339 - 825184

204846

ENSAPLT00000046004

620339 - 656335

35997

ENSAPLT00000021780

620493 - 732525

112033

ENSAPLT00000045607

620339 - 732710

112372

ENSAPLT00000014120

620339 - 657093

36755

ENSAPLT00000032362

620339 - 825184

204846

ENSAPLT00000031441

620339 - 803070

182732

ENSAPLT00000047322

620493 - 732628

112136