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Intron Name: Anas_platyrhynchos_platyrhynchos_19_6224409_6231765_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

6224409 - 6231765

Intron Length:

7357

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGAGGTCA

5'SS Class:

strong_major

3'SS Sequence:

TTTTCTTCTCTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TGTTAAT

U12 Branch Point Sequence:

AGCAGCTTAAAA

Flanking Amino Acid:

LDIKEPEILKGWMNEIYNYD

Intron Amino Acid Position:

544

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.7

0.84

0.9

74.5

31.6

Major BPS

84.4

0.85

34.5

Major PPT

87.8

0.85

0.6

81.8

30.3

Minor 5ss

31.6

-2.1

3.2

38.8

46.5

Minor BPS

48.4

-0.1

1.9

56.73

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000008476

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000008842

6222780 - 6238658

15879