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Intron Name: Anas_platyrhynchos_platyrhynchos_19_6234727_6238637_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

6234727 - 6238637

Intron Length:

3911

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTA|GTAATATTA

5'SS Class:

major

3'SS Sequence:

AGTTCTGACCAAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TTCTAAT

U12 Branch Point Sequence:

ATATTTTCAGTT

Flanking Amino Acid:

PPKKKKKKFLDCHSRS*

Intron Amino Acid Position:

820

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

64.9

0.35

1.1

66.1

33.7

Major BPS

94.5

1.11

0.6

92.2

14.6

Major PPT

52.3

0.05

1.2

49.5

42.8

Minor 5ss

43.4

-0.7

3.1

58.1

41.6

Minor BPS

48.8

-0

1.7

66.9

38.4

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000008476

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000008842

6222780 - 6238658

15879