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Intron Name: Anas_platyrhynchos_platyrhynchos_19_6246319_6246526_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

6246319 - 6246526

Intron Length:

208

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTAAGAGGA

5'SS Class:

strong_major

3'SS Sequence:

GTGCTCTCTTAAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TAATAAA

U12 Branch Point Sequence:

GTGTTCGTAATA

Flanking Amino Acid:

NIPPPPTDRIWYGFRRPPYL

Intron Amino Acid Position:

139

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.75

0.9

67.9

37.5

Major BPS

70.8

0.52

70.6

31.6

Major PPT

65.6

0.35

1.1

68.3

37.8

Minor 5ss

29.9

-2.3

3.3

35.5

43.1

Minor BPS

55.1

0.16

67.12

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000024940

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000028705

6240831 - 6247604

6774