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Intron Name: Anas_platyrhynchos_platyrhynchos_19_6262681_6271307_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

6262681 - 6271307

Intron Length:

8627

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGAGCAGA

5'SS Class:

strong_major

3'SS Sequence:

GTTGTTTATGCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGTTTAT

U12 Branch Point Sequence:

AGTATTATGACT

Flanking Amino Acid:

TGAIKWTLKEDPVLQVPIHV

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.3

0.83

0.9

74.1

38.4

Major BPS

81.3

0.78

1.1

71.7

44.6

Major PPT

78.8

0.65

73.7

40.9

Minor 5ss

33.3

-1.9

2.8

45.7

Minor BPS

48.9

-0

1.6

67.33

Associated Gene:

Gene:

ERN1

Ensembl Gene ID:

ENSAPLG00000007775

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000042721

6261101 - 6287964

26864

ENSAPLT00000008171

6262536 - 6287964

25429